Deeper Learning

The authors show that SAEs are inherently biased toward detecting only a subset of concepts in model activations shaped by their internal assumptions, highlighting the need for concept geometry-aware design of novel SAE architectures.

• Preprint
• Code (synthetic expt.)
• Code (formal lang. expt.)
• Code (vision expt.)

The authors present ATOMICA, a representation learning model that captures intermolecular interactions across all molecular modalities—proteins, nucleic acids, small molecules, and ions—at atomic resolution.

• Paper
• GitHub
• Huggingface

The authors find a sparse linear structure within VLM embedding spaces that is shaped by modality, yet stitched together through latent bridges—offering new insight into how multimodal meaning is constructed.

• Paper
• Demo

Backtracking is widely believed to improve reasoning by letting LLMs “fix their mistakes.” But is it always the best way to use test-time compute? The authors show that backtracking is not a one-size-fits-all solution: It depends on the task structure, model scale, and training paradigm.

• Paper
• Code

The researchers describe DUNL (Deconvolutional Unrolled Neural Learning), a novel framework for understanding how neurons encode information when they respond to multiple factors simultaneously.

• Paper
• Code

A smarter way to navigate complex drug decisions

The authors introduce TxAgent: a first of its kind AI agent for therapeutic reasoning across a universe of 211 tools, with a comparison against DeepSeek-R1 671B.

• Preprint
• TxAgent code
• ToolUniverse code
• Project website
• Huggingface

The authors find that Archetypal SAE anchors concepts in the real data’s convex hull and delivers consistent and stable dictionaries.

• Preprint
• Code

Through the use of recurrent neural networks trained to solve tasks requiring the integration of global information, but with constrained local connectivity, the authors find neurons learn to encode and transmit information to other spatially distant neurons through traveling waves.

• Preprint
• Repository

The authors use a new way of measuring the conceptual diversity of synthetically-generated LLM “populations” to investigate whether LLMs capture the conceptual diversity of human populations.

The authors introduce ProCyon, a multimodal foundation model to model, generate, and predict protein phenotypes.

• Preprint
• GitHub
• Project website
• Dataset